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Getting Started:

  • Installation
  • Quickstart
  • GUI Usage

Tutorials:

  • Structural analysis
  • Motion analysis
  • Batch processing of large data sets
  • Data export
  • Data visualization
  • Training data generation
  • Training of sarcomere U-Net++
  • Training of Z-band 3D U-Net
  • Training of ContractionNet

Sarcomere features:

  • Structural Features
  • Motion Features

API reference:

  • API Reference
    • sarcasm
    • contraction_net
SarcAsM
  • API Reference
  • Edit on GitHub

API Reference

This page contains auto-generated API reference documentation [1].

  • sarcasm
    • sarcasm._version
    • sarcasm.core
    • sarcasm.exceptions
    • sarcasm.export
    • sarcasm.feature_dict
    • sarcasm.ioutils
    • sarcasm.meta_data_handler
    • sarcasm.motion
    • sarcasm.plot_utils
    • sarcasm.plots
    • sarcasm.structure
    • sarcasm.training_data_generation
    • sarcasm.utils
  • contraction_net
    • contraction_net.annotation
    • contraction_net.contraction_net
    • contraction_net.data
    • contraction_net.losses
    • contraction_net.prediction
    • contraction_net.training
    • contraction_net.utils
[1]

Created with sphinx-autoapi

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